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Shashank P R's Groups
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CBOL Data Analysis Worki…
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BOLD Systems
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Problems in DNA barcoding
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Shashank P R's Discussions
Stop codons
3 Replies
Hello, everyoneCan you please help me out.I am finding stop codings in my COI sequences.Continue
Started this discussion. Last reply by Prasanna Kumar May 30, 2012.
Shashank P R's Page
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Prasanna Kumar replied to Shashank P R's discussion 'Stop codons'"Hey Shashank
That the common problem with ABI sequencers. Check ur chromatograms and make sure its free from mis-reading before sequence extraction.
If the sequence of species is available in NCBI, make use of it for alignment.
if still the…"
Shashank P R joined Megan A. Milton's group
BOLD Systems
The Barcode of Life Data Systems (BOLD) is an online workbench that aids collection, management, analysis, and use of DNA barcodes. See More
Shashank P R replied to Shashank P R's discussion 'Stop codons'"Hi, Thank you for information
I am using Folmer primers"
Gaikwad Swapnil Sopan replied to Shashank P R's discussion 'Stop codons'"Hi,
Shashank, there are chances of finding stop codons when you are using universal primer as they might amplify psudogenes. Which primers have you used?
Regards
Swapnil"
Shashank P R joined Gaikwad Swapnil Sopan's group
Problems in DNA barcoding
Dear all,This group is intend to solve problems occurred while analyzing barcode sequences and using appropriate method of analysis.See More
Shashank P R posted a discussionStop codons
Hello, everyoneCan you please help me out.I am finding stop codings in my COI sequences.See More
Profile Information
- Institution/Organization
- UAS Bangalore
- Title/Position
- Doctoral student
- I’m involved in, or am interested in the following barcoding initiatives
- Mosquito Barcoding Initiative, Tephritid Barcoding Initiative, DNA Barcoding Initiative for Conservation, Database Working Group, Data Analysis Working Group
- I’m involved in or interested in the following iBOL Working Groups
- WG1.5 Agricultural and Forestry Pests and Their Parasitoids, WG1.6 Pollinators, WG2.2 Museum Life, WG2.3 Methodological Innovation
- Keywords about my barcoding projects (separate each choice with a comma)
- Conogethes of India
- I’m involved in the following aspects of barcoding:
- Using barcode data in taxonomy/systematic biology
- Current Project(s)
- I am working on Conogethes sp. complex in India
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