"We don't support the automatic loading of tissue sample id's. The easiest way is to copy and paste them from something like excel - you can swap the direction that the bulk editor displays wells (from A01, A02, A03 etc to A01 B01 C01…"
I've put the file up on the web at the link below. It shouldn't be too dificult to map your data to this format, but if you would like to send me an example file, I'll try to improve the plugin to read…"
"I found the way to "Import Extraction Barcodes ". The output from barcode scanner cannot be used directly. We have to modify the csv output and save as an txt file. This txt file can be imported into extraction plates.
one more question. Is it possible to import Tissue Sample ID's into the Bulk Edit, or can they only be added manually?
Maybe you can email me the barcode scanner output file to gfischer(at)kfbg.org
thanks for your quick answer. Do you know the software VisionTracker from Thermo-Fisher. It is a sort of freezer-rack-box-tube storage management system, actually not very good but it fulfills its purpose. The principle idea is, that every…"
We currently support using 2d-barcoded tubes for extraction reactions. When you create your extraction plates, you can choose "Import Extraction Barcodes" from the tools menu in the bulk editor. If you move…"
we are starting to use Biocode, however we found that the workflows are not compatible with our DNA storage system from Themo Fisher. We use Thermo Fisher 2D barcode tubes in 96 well boxes and the VisionMate SR single rack scanner to…"
I suspect you're using version 8 of the database (the error message will confirm that for you). The most recent few versions of the plugin all use version 9 of the database. I have written a MySQL script which updates…"
Hi All,I tried to install the LIMS database but I got an error message saying that I am running an older version of the LIMS than the Biocode plugin was designed for.Any ideas how to solve thatthanksGunterSee More
The Biocode LIMS plugin is a free suite of plugins to Geneious that allow you to track and manage your entire lab workflow, from tissue samples through to Sequence analysis and Genbank Submission. Visit our website to download the plugins.See More
I’m involved in, or am interested in the following barcoding initiatives
DNA Barcoding Initiative for Conservation, Plant Working Group, Database Working Group, Data Analysis Working Group
I’m involved in or interested in the following iBOL Working Groups
WG1.2 Land Plants, WG1.3 Fungi, WG1.6 Pollinators, WG4.1 Environmental Barcoding, WG4.2 Mobile Barcoding
I’m involved in the following aspects of barcoding:
Fieldwork/specimen collecting, Museum work/specimen curation, Labwork/generating barcode sequences, Management of barcode data, Analysis of barcode data, Using barcode data in taxonomy/systematic biology, Organizing/managing barcoding projects, Science policy related to barcoding
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