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international online community for dna barcoding professionals

Gaikwad Swapnil Sopan
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Gaikwad Swapnil Sopan's Colleagues

  • Shoeb Patel
  • PRIYANKA MISHRA
  • Dr. Jitendra Kumar Shakya
  • Praveen
  • Biswajit Bose
  • Dr. Mustafa S. Faddagh
  • Dr A P Singh
  • Dhivya
  • Mansi Mungee
  • Dr.C.VADIVALAGAN
  • Dario Lijtmaer
  • Francis Kidangan
  • Rasika Bhagwat
  • Gulab D Khedkar
  • Karen James

Gaikwad Swapnil Sopan's Groups

 

Gaikwad Swapnil Sopan's Page

Latest Activity

srinu g joined Gaikwad Swapnil Sopan's group
Thumbnail

Problems in DNA barcoding

Dear all,This group is intend to solve problems occurred while analyzing barcode sequences and using appropriate method of analysis.See More
Nov 13
sreejith kanholi commented on Gaikwad Swapnil Sopan's group 'Problems in DNA barcoding'
"SIr, I have got a curated specimen of Viverridae family. The specimen is dried and kept in the museum for many years. I doubt that it is treated with borric powder and other preservative used in taxidermy. How can we remove the inhibitant from the…"
Nov 7
Gaikwad Swapnil Sopan replied to Kathy McHoes's discussion 'Questions and Answers about Connect'
"Dear Amrita, Try software SeaView. Regards"
Jul 28
Gaikwad Swapnil Sopan replied to sreejith kanholi's discussion 'Sequence error' in the group Problems in DNA barcoding
"Hi Sreejith, Try to align your sequences with sequences without frame shift and find out the position where problem lies. Then try to compare with .ab files. Which software do you use for editing trace files"
Jul 24
Gaikwad Swapnil Sopan is now colleagues with Shoeb Patel and PRIYANKA MISHRA
Jul 24
Gaikwad Swapnil Sopan commented on Gaikwad Swapnil Sopan's group 'Problems in DNA barcoding'
"Dear Sreejith, There is no specific kit for such isolation. But you can wash your samples with PBS with continuous shaking at slow speed and you can keep this for overnight also and then try to isolate DNA"
Jul 24
sreejith kanholi commented on Gaikwad Swapnil Sopan's group 'Problems in DNA barcoding'
"Dear all, I am trying to isolate DNA from Borric acid/sodium borate preserved dried specimen. Is there any isolation Kit available for this type ."
Jul 24
Gaikwad Swapnil Sopan replied to sreejith kanholi's discussion 'Sequence error' in the group Problems in DNA barcoding
"Dear Sreejith This problem is common if your trace file is not properly corrected, sometimes unknowingly bases are inserted. This leads to frame shift. correct your trace files once again Regards Dr. Swapnil Gaikwad"
Jul 24
Gaikwad Swapnil Sopan commented on Gaikwad Swapnil Sopan's group 'Problems in DNA barcoding'
"Dear Amrita, This is regarding dendogram, you can concatenate sequence of both the locus and then generate dendogram using MEGA"
Jul 24
Amrita Sinha commented on Gaikwad Swapnil Sopan's group 'Problems in DNA barcoding'
"Hello everyone,  Presently I am using MEGA5 software for analyzing the data obtained from sequencing. But it generates one dendrogram for one locus. Is their any free software available for generating a combined dendrograms using more than one…"
Jul 24
Amrita Sinha commented on Gaikwad Swapnil Sopan's group 'Problems in DNA barcoding'
"Hello Mam, I wanted to know the protocol used to make the master mix. I had obtained the amplicons using the Bamboo DNA and barcode primers. Now by using the components of Big dye Direct cycle sequencing kit how can I make the reaction mix to…"
Jul 24
PRIYANKA MISHRA commented on Gaikwad Swapnil Sopan's group 'Problems in DNA barcoding'
"hello Amrita, Please elaborate the problems step wise, you are facing during sequencing."
Jul 23
Amrita Sinha commented on Gaikwad Swapnil Sopan's group 'Problems in DNA barcoding'
"Hi, Presently I am working on DNA barcoding in bamboos. I am facing problem in sequencing. Any one can please help me in providing the protocols for sequencing. I have with me 3500 genetic analyzer and Big dye Direct cycle sequencing kit."
Jul 23
Amrita Sinha joined Gaikwad Swapnil Sopan's group
Thumbnail

Problems in DNA barcoding

Dear all,This group is intend to solve problems occurred while analyzing barcode sequences and using appropriate method of analysis.See More
Jul 23
sreejith kanholi joined Gaikwad Swapnil Sopan's group
Thumbnail

Problems in DNA barcoding

Dear all,This group is intend to solve problems occurred while analyzing barcode sequences and using appropriate method of analysis.See More
Jul 18
Alma Hernández de Rojas joined Gaikwad Swapnil Sopan's group
Thumbnail

Problems in DNA barcoding

Dear all,This group is intend to solve problems occurred while analyzing barcode sequences and using appropriate method of analysis.See More
Jun 11

Profile Information

Institution/Organization
Dept. of Zoology, University of Pune, India
Title/Position
Doctoral student
I’m involved in, or am interested in the following barcoding initiatives
FISH-BOL, All Birds Barcoding Initiative, Marine Barcode of Life (MarBOL), DNA Barcoding Initiative for Conservation, Database Working Group, Data Analysis Working Group, Leading Labs Network
I’m involved in or interested in the following iBOL Working Groups
WG1.4 Human Pathogens and Zoonoses, WG1.5 Agricultural and Forestry Pests and Their Parasitoids, WG1.7 Freshwater Bio-Surveillance, WG2.2 Museum Life, WG2.3 Methodological Innovation, WG2.4 Paleobarcoding
Keywords about my barcoding projects (separate each choice with a comma)
Lepidoptera, Western Ghats, Wolbachia
I’m involved in the following aspects of barcoding:
Fieldwork/specimen collecting, Labwork/generating barcode sequences, Analysis of barcode data, Using barcode data in taxonomy/systematic biology, Using barcode data for other applications
Current Project(s)
Currently I am doing barcoding of Lepidoptera from Western Ghats along with bugs

Comment Wall (4 comments)

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At 1:25am on October 10, 2011, Dr.C.VADIVALAGAN said…

thank you Swapnil,

kindly cheak your Email.

At 1:22am on October 8, 2011, Dr.C.VADIVALAGAN said…
we both are working same field but i dont know which group u have to take this study
At 10:47pm on November 17, 2010, Mansi Mungee said…
Swapnil, Hi.
I will shortly be starting barcoding Lepidoptera of Eastern Himalayas. I came across your profile and see that you already are working along the same line in Western Ghats?
Since I too have moved to Pune recently, it makes sense we share some information and keep in touch?
Let me know if thats ok with you.
Mansi
(mansi.2303@gmail.com)
At 2:23pm on December 16, 2009, Kris Jett said…
Hello and welcome!

Thank you for taking the time to join. Here are a few things that you can do in the community.

After completing your online profile, please add yourself to the member map.
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For assistance, don’t hesitate to contact me.

Again, thank you for joining our growing online community. I look forward to connecting with you soon.

-Kris Jett
 
 
 

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